Zhilei Zhao, Jessica L. Zung, Annika Hinze, Alexis L. Kriete, Azwad Iqbal, Meg A. Younger, Benjamin J. Matthews, Dorit Merhof, Stephan Thiberge, Rickard Ignell, Martin Strauch and Carolyn S. McBride Mosquito brains encode unique features of human odour to drive host seeking In: Nature
2022
Long Chen, Matthias Daub, Hans-Georg Luigs, Marcus Jansen, Martin Strauch and Dorit Merhof High-throughput Phenotyping of Nematode Cysts In: Frontiers in Plant Science
2021
Dimitrios Kapsokalyvas, Rodrigo Rosas, Rob Janssen, Jo Vanoevelen, Miranda Nabben, Martin Strauch, Dorit Merhof, Marc van Zandvoort Multiview deconvolution approximation multiphoton microscopy of tissues and zebrafish larvae. In: Scientific Reports 11 (10160)
2021
David Fleck, Lina Kenzler, Nadine Mundt, Martin Strauch, Naofumi Uesaka, Robert Moosmann, Felicitas Bruentgens, Annika Missel, Artur Mayerhofer, Dorit Merhof, Jennifer Spehr and Marc Spehr ATP activation of peritubular cells drives testicular sperm transport In: eLife 10:e62885
2020
Michael Schleyer, Alice Weiglein, Juliane Thoener, Martin Strauch, Volker Hartenstein, Melisa Kantar Weigelt, Sarah Schuller, Timo Saumweber, Katharina Eichler, Astrid Rohwedder, Dorit Merhof, Marta Zlatic, Andreas Stefan Thum and Bertram Gerber Identification of dopaminergic neurons that can both establish associative memory and acutely terminate its behavioral expression In: Journal of Neuroscience 40 (31)
2019
Laura Hoppe Alvarez, Sabine Eisold, Rustam A. Gumerov, Martin Strauch, Andrey A. Rudov, Pia Lenssen, Dorit Merhof, Igor I. Potemkin, Ulrich Simon and Dominik Wöll Deformation of Microgels at Solid-Liquid Interfaces Visualized in Three-Dimension In: Nano Letters 19 (12)
2018
Sascha E.A. Muenzing, Martin Strauch, James W. Truman, Katja Bühler, Andreas Thum and Dorit Merhof larvalign: Aligning gene expression patterns from the larval brain of Drosophila melanogaster In: Neuroinformatics 16 (1)
2017
Eugenio Martinelli, Alja Lüdke, Piergiorgio Adamo, Martin Strauch, Corrado Di Natale and C. Giovanni Galizia Normalizing brain activity across individuals using functional reference mapping In: Scientific Reports 7 (17128)
2013
Martin Strauch, Clemens Müthing, Marc P. Brög, Paul Szyska, Daniel Münch, Thomas Laudes, Oliver Deussen, C. Giovanni Galizia and Dorit Merhof The Looks of an Odor - Visualising Neural Odor Response Patterns in Real Time In: BMC Bioinformatics 14 (Suppl 19)
Eduardo Hatano, Ahmed M. Saveer, Felipe Borrero-Echeverry, Martin Strauch, Ali Zakir, Marie Bengtsson, Bill Hansson, Rickard Ignell, Peter Anderson, Paul G. Becher, Peter Witzgall, Teun Dekker: “A herbivore-induced plant volatile interferes with host plant and mate location in moths through suppression of olfactory signalling pathways.”, BMC Biology, 13:75, 2015
Jan Beran, Arno Weiershäuser, C. Giovanni Galizia, Julia Rein, Brian H. Smith, Martin Strauch: “On piecewise polynomial regression under general dependence conditions with an application to calcium-imaging data.”, Sankhya Series B, Springer, Volume 76, Issue 1, pp 49-81, 2014
Martin Strauch, Alja Lüdke, Daniel Münch, Thomas Laudes, C. Giovanni Galizia, Eugenio Martinelli, Luca Lavra, Roberto Paolesse, Alessandra Ulivieri, Alexandro Catini, Rosamaria Capuano, Corrado Di Natale: “More than apples and oranges – Detecting cancer with a fruit fly’s antenna.”, Scientific Reports, 4:3576, 2014 (cancer-sniffing fruit flies in the media)
Martin Strauch, Clemens Müthing, Marc P. Broeg, Paul Szyszka, Daniel Münch, Thomas Laudes, Oliver Deussen, C. Giovanni Galizia, Dorit Merhof: “The looks of an odor – Visualising neural odor response patterns in real time.”, BMC Bioinformatics, 14(Suppl 19):S6, 2013 (media report: BioPro)
Julia Rein, Julie A. Mustard, Martin Strauch, Brian H. Smith, C. Giovanni Galizia: “Octopamine modulates activity of neural networks in the honey bee antennal lobe”, Journal of Comparative Physiology A, Vol 199:11, pp. 947-962, 2013
Martin Strauch, Julia Rein, Christian Lutz, C. Giovanni Galizia: “Signal extraction from movies of honeybee brain activity by convex analysis: The ImageBee plugin for KNIME.”, BMC Bioinformatics, 14(Suppl 18):S4, 2013
Martin Strauch, Mathias Ditzen, C. Giovanni Galizia: “Keeping their distance? Odor response patterns along the concentration range.”, Frontiers in Systems Neuroscience, 6:71, 2012
C. Giovanni Galizia, Daniel Münch, Martin Strauch, Anja Nissler, Shouwen Ma: “Integrating heterogeneous odor response data into a common response model: A DoOR to the complete olfactome.”, Chemical Senses, volume 35, pp. 551-563, 2010 (cover of the september 2010 issue; commentary by Hansson and Stensmyr)
Jochen Supper, Martin Strauch, Dierk Wanke, Klaus Harter, Andreas Zell: “EDISA: Extracting biclusters from multiple time-series of gene-expression profiles.”, BMC Bioinformatics, 8:334, 2007
Martin Strauch, Jochen Supper, Christian Spieth, Dierk Wanke, Joachim Kilian, Klaus Harter and Andreas Zell: “A Two-Step Clustering for 3-D Gene Expression Data Reveals the Main Features of the Arabidopsis Stress Response.”,Journal of Integrative Bioinformatics, 4(1):54, 2007
Konferenz-Veröffentlichungen
2022
Long Chen, Martin Strauch, Matthias Daub, Hans-Georg Luigs, Marcus Jansen and Dorit Merhof$ Learning to Segment Fine Structures Under Image-Level Supervision With an Application to Nematode Segmentation In: International Engineering in Medicine and Biology Conference (EMBC)
2020
Long Chen, Weiwen Zhang, Yuli Wu, Martin Strauch and Dorit Merhof Semi-supervised Instance Segmentation with a Learned Shape Prior In: MICCAI Workshop on Medical Image Learning with Less Labels and Imperfect Data (MIL3ID)
2020
Long Chen, Martin Strauch, Matthias Daub, Xiaochen Jiang, Marcus Jansen, Hans-Georg Luigs, Susanne Schultz-Kuhlmann, Stefan Kruessel and Dorit Merhof A CNN Framework Based on Line Annotations for Detecting Nematodes in Microscopic Images In: IEEE International Symposium on Biomedical Imaging (ISBI)
2019
Martin Strauch, Karl Krüger, Latha Mukunda, Alja Lüdke, C. Giovanni Galizia and Dorit Merhof Interpolating maps between neural response spaces for chemosensing with fruit fly antenna sensors. In: IEEE International Conference on Bioinformatics and Bioengineering (BIBE)
2019
Long Chen, Martin Strauch and Dorit Merhof Instance Segmentation of Biomedical Images with an Object-aware Embedding Learned with Local Constraints In: International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
2019
Long Chen, Martin Strauch, Matthias Daub, Marcus Jansen, Hans-Georg Luigs and Dorit Merhof Instance Segmentation of Nematode Cysts in Microscopic Images of Soil Samples In: International Engineering in Medicine and Biology Conference (EMBC)
2018
Martin Strauch, Latha Mukunda, Alja Lüdke, C. Giovanni Galizia and Dorit Merhof Recovering a chemotopic feature space from a group of fruit fly antenna chemosensors. In: 18th IEEE Conference on Bioinformatics and Bioengineering (BIBE)
2018
Martin Strauch, Volker Hartenstein, Ingrid V. Andrade, Albert Cardona and Dorit Merhof Annotated dendrograms for neurons from the larval fruit fly brain. In: Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM)
2016
Martin Strauch, Markus Rothermel, Matt Wachowiak and Dorit Merhof Smoothness-constrained convex cone analysis for signal extraction from calcium imaging movies In: IEEE International Symposium on Biomedical Imaging (ISBI)
2016
Michael Gadermayr, Martin Strauch, Barbara Mara Klinkhammer, Sonja Djudjaj, Peter Boor and Dorit Merhof Domain Adaptive Classification for Compensating Variability in Histopathological Whole Slide Images In: International Conference on Image Analysis and Recognition (ICIAR)
Martin Strauch, Marc P. Broeg, Clemens Müthing, Paul Szyszka, Oliver Deussen, C. Giovanni Galizia, Dorit Merhof: “INCIDE the Brain of a Bee – Visualising Honeybee Brain Activity in Real Time by Semantic Segmentation.”, pp. 17-24, Symposium on Biological Data Visualization (BioVis), Oct 14-15 2012, Seattle, USA, IEEE, 2012 (“honorable mention” award)
Martin Strauch, C. Giovanni Galizia: “Registration to a neuroanatomical reference atlas – identifying glomeruli in optical recordings of the honeybee brain.”, P-136, pp. 85-95, German Conference on Bioinformatics (GCB), Sep 9-12 2008, Dresden, Germany, Lecture Notes in Informatics, 2008
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