Georg Wimmer, Michael Gadermayr, Roland Kwitt, Michael Häfner, Toru Tamaki, Shigeto Yoshida Shinji Tanaka, Dorit Merhof and Andreas Uhl
Training of Polyp Staging Systems using Mixed Imaging Modalities
In: Computers in Biology and Medicine

Sascha E.A. Muenzing, Martin Strauch, James W. Truman, Katja Bühler, Andreas Thum and Dorit Merhof
larvalign: Aligning gene expression patterns from the larval brain of Drosophila melanogaster
In: Neuroinformatics 16 (1)

B. Mattes, Y. Dang, G. Greicius, L. T. Kaufmann, S. Özbek, B. Prunsche, J. Rosenbauer, J. Stegmaier, R. Mikut, G. U. Nienhaus, A. Schug, D. M. Virshup and S. Scholpp
Wnt/PCP Controls Spreading of Wnt/b-Catenin Signals by Cytonemes in Vertebrates
In: eLife

H. M. T. Choi, M. Schwarzkopf, M. E. Fornace, A. Acharya, G. Artavanis, J. Stegmaier, A. Cunha and N. A. Pierce
Third-Generation In Situ Hybridization Chain Reaction: Multiplexed, Quantitative, Sensitive, Versatile, Robust
In: Development

B. Schott, M. Traub, C. Schlagenhauf, M. Takamiya, T. Antritter, A. Bartschat, K. Löffler, D. Blessing, J. C. Otte, A. Y. Kobitski, G. U. Nienhaus, U. Strähle, R. Mikut and J. Stegmaier
EmbryoMiner: A New Framework for Interactive Knowledge Discovery in Large-Scale Cell Tracking Data of Developing Embryos
In: PLOS Computational Biology 14 (4)

Joschka zur Jacobsmühlen, Jan Achterhold, Stefan Kleszczynski, Gerd Witt and Dorit Merhof
In-situ Measurement of Part Geometries in Layer Images from Laser Beam Melting Processes
In: Progress in Additive Manufacturing

Michael Gadermayr, Georg Wimmer, Hubert Kogler, Andreas Vécsei, Dorit Merhof and Andreas Uhl
Automated Classification of Celiac Disease During Upper Endoscopy: Status Quo and Quo Vadis
In: Computers in Biology and Medicine

Michael Gadermayr, Constantin Disch, Madlaine Müller, Dorit Merhof and Burkhard Gess
A Comprehensive Study on Automated Muscle Segmentation for Assessing Fat Infiltration in Neuromuscular Diseases
In: Magnetic Reconance Imaging (MRI) 48

Daniel Brückner, Peter Kämmerling, Gerd Krenzer, Dietrich Meyer-Ebrecht and Mike Rabald
Tihange–Doel Radiation Monitoring
In: FIfF-Kommunikation 1/18

Alfred H. Böcking, David Friedrich, Dietrich Meyer-Ebrecht, Chenyan Zhu, Anna Feider and Stefan Biesterfeld
Automated Detection of Cancer Cells in Effusion Specimens by DNA Karyometry
In: Cancer Cytopathology

Leon Weninger, Oliver Rippel, Simon Koppers and Dorit Merhof
Segmentation of Brain Tumors in 3D-MRI Data and Patient Survival Prediction: Methods for the BraTS 2018 Challenge
In: MICCAI Brainlesion Workshop (BrainLes)

Leon Weninger, Marcin Kopaczka and Dorit Merhof
Defect Detection in Plain Weave Fabrics by Yarn Tracking and Fully Convolutional Networks
In: IEEE International Instrumentation and Measurement Technology Conference (I2MTC)

Martin Strauch, Latha Mukunda, Alja Lüdke, C. Giovanni Galizia and Dorit Merhof
Recovering a chemotopic feature space from a group of fruit fly antenna chemosensors.
In: 18th IEEE Conference on Bioinformatics and Bioengineering (BIBE)

Martin Strauch, Volker Hartenstein, Ingrid V. Andrade, Albert Cardona and Dorit Merhof
Annotated dendrograms for neurons from the larval fruit fly brain.
In: Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM)

Tarek Stiebel, Dieter Geller and Dorit Merhof
Correction of Thread Position Mismatch in High Precision CNC Sewing
In: IEEE 23rd International Conference on Emerging Technologies and Factory Automation (ETFA)

Tarek Stiebel and Dorit Merhof
A Robust Algorithm for Computing Boundary Points of the Metamer Mismatch Body
In: Twenty-sixth Color and Imaging Conference (CIC)

Tarek Stiebel, Marcel Bosling, Aljoscha Steffens, Thomas Pretz and Dorit Merhof
An Inspection System for Multi-Label Polymer Classification
In: IEEE 23rd International Conference on Emerging Technologies and Factory Automation (ETFA)

Boaz Arad, Ohad Ben-Shahar, Radu Timofte, Luc Van Gool, Lei Zhang, Ming-Hsuan Yang, Zhiwei Xiong, Chang Chen, Zhan Shi, Dong Liu, Feng Wu, Charis Lanaras, Silvano Galliani, Konrad Schindler, Tarek Stiebel, Simon Koppers, Philipp Seltsam, Ruofan Zhou, Majed El Helou, Fayez Lahoud, Marjan Shahpaski, Ke Zheng, Lianru Gao, Bing Zhang, Ximin Cui, Haoyang Yu, Yigit Baran Can, Aitor Alvarez-Gila, Joost van de Weijer, Estibaliz Garrote, Adrian Galdran, Manoj Sharma, Sriharsha Koundinya, Avinash Upadhyay, Raunak Manekar, Rudrabha Mukhopadhyay, Himanshu Sharma, Santanu Chaudhury, Koushik Nagasubramanian, Sambuddha Ghosal, Asheesh K. Singh, Arti Singh, Baskar Ganapathysubramanian and Soumik Sarkar
NTIRE 2018 Challenge on Spectral Reconstruction from RGB Images
In: The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops

Marcel Bosling, Tarek Stiebel, Aljoscha Steffens, Dorit Merhof and Thomas Pretz
An Evaluation of Plastic Classification Techniques using Hyperspectral Near-Infrared Imaging
In: Sensor Based Sorting & Control (SBSC)

Tarek Stiebel, Simon Koppers, Philipp Seltsam and Dorit Merhof
Reconstructing Spectral Images from RGB-Images using a Convolutional Neural Network
In: IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops

T. Scherr, A. Bartschat, M. Reischl, J. Stegmaier and R. Mikut
Best Practices in Deep Learning-Based Segmentation of Microscopy Images
In: Proceedings 28. Workshop Computational Intelligence

Simon Koppers, Luke Bloy, Jeffrey I. Berman, Chantal M.W. Tax, J. Christopher Edgar and Dorit Merhof
Spherical Harmonic Residual Network for Diffusion Signal Harmonization
In: MICCAI Workshop on Computational Diffusion MRI (CDMRI)

Marcin Kopaczka, Justus Schock, Jan Nestler, Kevin Kielholz and Dorit Merhof
A combined modular system for face detection, head pose estimation, face tracking and emotion recognition in thermal infrared images
In: IEEE International Conference on Imaging Systems and Techniques (IST)

Marcin Kopaczka, Lisa Ernst, Justus Schock, Arne Schneuing, Alexander Guth, René H. Tolba and Dorit Merhof
Introducing CNN-Based Mouse Grim Scale Analysis for Fully Automated Image-Based Assessment of Distress in Laboratory Mice (Short Paper)
In: Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM)

Marcin Kopaczka, Philipp Gräbel and Dorit Merhof
Improved Facial Landmark Detection with Robust Statistics and Feature-Based Active Appearance Models
In: 15th International Conference on Signal Processing and Multimedia Applications (SIGMAP)

Marcin Kopaczka, Raphael Kolk and Dorit Merhof
A Fully Annotated Thermal Face Database and its Application for Thermal Facial Expression Recognition
In: IEEE International Instrumentation and Measurement Technology Conference (I2MTC)

Marcin Kopaczka, Lisa Ernst, Jakob Heckelmann, Christoph Schorn, René Tolba and Dorit Merhof
Automatic Key Frame Extraction From Videos For Efficient Mouse Pain Scoring
In: 5th International Conference on Signal Processing and Integrated Networks (SPIN)

Marcin Kopaczka, Thomas Jantos and Dorit Merhof
Towards Analysis of Mental Stress using Thermal Infrared Tomography
In: Bildverarbeitung für die Medizin (BVM)

Marcin Kopaczka, Marco Saggiomo, Moritz Guettler, Thomas Gries and Dorit Merhof
Fully Automatic Faulty Weft Thread Detection Using a Camera System and Feature-Based Pattern Recognition
In: 7th International Conference on Pattern Recognition Applications and Methods (ICPRAM)

T. V. Spina, J. Stegmaier, A. Falcao, E. Meyerowitz and A. Cunha
SEGMENT3D: A Web-based Application for Collaborative Segmentation of 3D Images used in the Shoot Apical Meristem
In: IEEE International Symposium on Biomedical Imaging (ISBI), Washington D.C., USA

J. Stegmaier, T. V. Spina, A. Falcao, A. Bartschat, R. Mikut, E. Meyerowitz and A. Cunha
Cell Segmentation in 3D Microscopy Images using Supervoxel Merge-Forests with CNN-based Hypothesis Selection
In: IEEE International Symposium on Biomedical Imaging (ISBI), Washington D.C., USA

Christoph Haarburger, Johannes Rüther, Daniel Truhn, Simone Schrading, Daniel Bug, Christiane K. Kuhl and Dorit Merhof
Abbreviated Breast Biopsy Procedure by Registration of Craniocaudal and Mediolateral Breast MR Images
In: IEEE International Symposium on Biomedical Imaging (ISBI)

Christoph Haarburger, Peter Langenberg, Daniel Truhn, Hannah Schneider, Johannes Thüring, Simone Schrading, Christiane K. Kuhl and Dorit Merhof
Transfer Learning for Breast Cancer Malignancy Classification based on Dynamic Contrast-Enhanced MR Images
In: Bildverarbeitung für die Medizin (BVM)

Laxmi Gupta, Barbara Mara Klinkhammer, Peter Boor, Dorit Merhof and Michael Gadermayr
Stain Independent Segmentation of Whole Slide Images: A Case Study in Renal Histology
In: IEEE International Symposium on Biomedical Imaging (ISBI)

Philipp Gräbel, Martina Crysandt, Reinhild Herwartz, Melanie Hoffmann, Barbara M. Klinkhammer, Peter Boor, Tim H. Brümmendorf and Dorit Merhof
Evaluating Out-of-the-box Methods for the Classification of Hematopoietic Cells in Images of Stained Bone Marrow
In: 1st MICCAI Workshop on Computational Pathology (COMPAY)

Michael Gadermayr, Vitus Appel, Barbara M. Klinkhammer, Peter Boor and Dorit Merhof
Which Way Round? A Study on the Performance of Stain-Translation for Segmenting Arbitrarily Dyed Histological Images
In: International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)

Michael Gadermayr, Dennis Eschweiler, Barbara Mara Klinkhammer, Peter Boor and Dorit Merhof
Gradual Domain Adaptation for Segmenting Whole Slide Images Showing Pathological Variability
In: International Conference on Image and Signal Processing (ICISP)

Long Chen and Dorit Merhof
MixNet: Multi-modality Mix Network for Brain Segmentation
In: MICCAI Brainlesion Workshop (BrainLes)

A. Bartschat, T. Unger, T. Scherr, J. Stegmaier, M. Reischl and R. Mikut
Robustness of Deep Learning Architectures with Respect to Training Data Variation
In: Proceedings 28. Workshop Computational Intelligence