Books and book chapters
Journal Publications
 | 2018 BibTeX | Georg Wimmer, Michael Gadermayr, Roland Kwitt, Michael Häfner, Toru Tamaki, Shigeto Yoshida Shinji Tanaka, Dorit Merhof, Andreas Uhl Training of Polyp Staging Systems using Mixed Imaging Modalities In: Computers in Biology and Medicine |
 | 2018 BibTeX PDF | Sascha E.A. Muenzing, Martin Strauch, James W. Truman, Katja Bühler, Andreas Thum and Dorit Merhof larvalign: Aligning gene expression patterns from the larval brain of Drosophila melanogaster In: Neuroinformatics 16 (1) |
 | 2018 BibTeX PDF | B. Mattes, Y. Dang, G. Greicius, L. T. Kaufmann, S. Özbek, B. Prunsche, J. Rosenbauer, J. Stegmaier, R. Mikut, G. U. Nienhaus, A. Schug, D. M. Virshup, S. Scholpp Wnt/PCP Controls Spreading of Wnt/b-Catenin Signals by Cytonemes in Vertebrates In: eLife |
 | 2018 BibTeX PDF | H. M. T. Choi, M. Schwarzkopf, M. E. Fornace, A. Acharya, G. Artavanis, J. Stegmaier, A. Cunha, N. A. Pierce Third-Generation In Situ Hybridization Chain Reaction: Multiplexed, Quantitative, Sensitive, Versatile, Robust In: Development |
 | 2018 BibTeX PDF | B. Schott, M. Traub, C. Schlagenhauf, M. Takamiya, T. Antritter, A. Bartschat, K. Löffler, D. Blessing, J. C. Otte, A. Y. Kobitski, G. U. Nienhaus, U. Strähle, R. Mikut, J. Stegmaier EmbryoMiner: A New Framework for Interactive Knowledge Discovery in Large-Scale Cell Tracking Data of Developing Embryos In: PLOS Computational Biology 14 (4) |
 | 2018 BibTeX | Joschka zur Jacobsmühlen, Jan Achterhold, Stefan Kleszczynski, Gerd Witt and Dorit Merhof In-situ Measurement of Part Geometries in Layer Images from Laser Beam Melting Processes In: Progress in Additive Manufacturing |
 | 2018 BibTeX PDF | Michael Gadermayr, Georg Wimmer, Hubert Kogler, Andreas Vécsei, Dorit Merhof and Andreas Uhl Automated Classification of Celiac Disease During Upper Endoscopy: Status Quo and Quo Vadis In: Computers in Biology and Medicine |
 | 2018 BibTeX PDF | Michael Gadermayr, Constantin Disch, Madlaine Müller, Dorit Merhof and Burkhard Gess A Comprehensive Study on Automated Muscle Segmentation for Assessing Fat Infiltration in Neuromuscular Diseases In: Magnetic Reconance Imaging (MRI) 48 |
 | 2018 BibTeX PDF | Daniel Brückner, Peter Kämmerling, Gerd Krenzer, Dietrich Meyer-Ebrecht and Mike Rabald Tihange–Doel Radiation Monitoring In: FIfF-Kommunikation 1/18 |
Conference Publications
 | 2018 BibTeX PDF | Leon Weninger, Marcin Kopaczka and Dorit Merhof Defect Detection in Plain Weave Fabrics by Yarn Tracking and Fully Convolutional Networks In: IEEE International Instrumentation and Measurement Technology Conference (I2MTC) |
 | 2018 BibTeX | Martin Strauch, Latha Mukunda, Alja Lüdke, C. Giovanni Galizia and Dorit Merhof Recovering a chemotopic feature space from a group of fruit fly antenna chemosensors. In: Proceedings of the 18th IEEE Conference on Bioinformatics and Bioengineering (BIBE 2018) |
 | 2018 BibTeX PDF | Martin Strauch, Volker Hartenstein, Ingrid V. Andrade, Albert Cardona and Dorit Merhof Annotated dendrograms for neurons from the larval fruit fly brain. In: Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM) |
 | 2018 BibTeX PDF | Tarek Stiebel, Dieter Geller and Dorit Merhof Correction of Thread Position Mismatch in High Precision CNC Sewing In: IEEE 23rd International Conference on Emerging Technologies and Factory Automation (ETFA) |
 | 2018 BibTeX | Tarek Stiebel and Dorit Merhof A Robust Algorithm for Computing Boundary Points of the Metamer Mismatch Body In: Twenty-sixth Color and Imaging Conference (CIC) |
 | 2018 BibTeX PDF | Tarek Stiebel, Marcel Bosling, Aljoscha Steffens, Thomas Pretz and Dorit Merhof An Inspection System for Multi-Label Polymer Classification In: IEEE 23rd International Conference on Emerging Technologies and Factory Automation (ETFA) |
 | 2018 BibTeX PDF | Boaz Arad, Ohad Ben-Shahar, Radu Timofte, Luc Van Gool, Lei Zhang, Ming-Hsuan Yang, Zhiwei Xiong, Chang Chen, Zhan Shi, Dong Liu, Feng Wu, Charis Lanaras, Silvano Galliani, Konrad Schindler, Tarek Stiebel, Simon Koppers, Philipp Seltsam, Ruofan Zhou, Majed El Helou, Fayez Lahoud, Marjan Shahpaski, Ke Zheng, Lianru Gao, Bing Zhang, Ximin Cui, Haoyang Yu, Yigit Baran Can, Aitor Alvarez-Gila, Joost van de Weijer, Estibaliz Garrote, Adrian Galdran, Manoj Sharma, Sriharsha Koundinya, Avinash Upadhyay, Raunak Manekar, Rudrabha Mukhopadhyay, Himanshu Sharma, Santanu Chaudhury, Koushik Nagasubramanian, Sambuddha Ghosal, Asheesh K. Singh, Arti Singh, Baskar Ganapathysubramanian and Soumik Sarkar NTIRE 2018 Challenge on Spectral Reconstruction from RGB Images In: The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops |
 | 2018 BibTeX | Marcel Bosling, Tarek Stiebel, Aljoscha Steffens, Dorit Merhof and Thomas Pretz An Evaluation of Plastic Classification Techniques using Hyperspectral Near-Infrared Imaging In: Sensor Based Sorting & Control (SBSC) |
 | 2018 BibTeX | Tarek Stiebel, Simon Koppers, Philipp Seltsam and Dorit Merhof Reconstructing Spectral Images from RGB-Images using a Convolutional Neural Network In: The IEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops |
 | 2018 BibTeX | Chantal M.W. Tax, Francesco Grussu, Enrico Kaden, Lipeng Ning, Umesh Rudrapatna, John Evans, Samuel St-Jean, Alexander Leemans, Santi Puch, Matt Rowe, Paulo Rodrigues, Vesna Prčkovska, Simon Koppers, Dorit Merhof, Aurobrata Ghosh, Ryutaro Tanno, Daniel C. Alexander, Cyril Charron, Slawomir Kusmia, David E.J. Linden, Derek K. Jones, Jelle Veraart Cross-vendor and Cross-protocol harmonisation of diffusion MRI data: a comparative study In: International Society for Magnetic Resonance in Medicine (ISMRM) |
 | 2018 BibTeX PDF | Simon Koppers, Luke Bloy, Jeffrey I. Berman, Chantal M.W. Tax, J. Christopher Edgar and Dorit Merhof Spherical Harmonic Residual Network for Diffusion Signal Harmonization In: MICCAI Workshop on Computational Diffusion MRI (CDMRI) |
 | 2018 BibTeX PDF | Marcin Kopaczka, Justus Schock, Jan Nestler, Kevin Kielholz and Dorit Merhof A combined modular system for face detection, head pose estimation, face tracking and emotion recognition in thermal infrared images In: IEEE International Conference on Imaging Systems and Techniques (IST) 2018 |
 | 2018 BibTeX PDF | Marcin Kopaczka, Lisa Ernst, Justus Schock, Arne Schneuing, Alexander Guth, René H. Tolba, Dorit Merhof Introducing CNN-Based Mouse Grim Scale Analysis for Fully Automated Image-Based Assessment of Distress in Laboratory Mice In: Eurographics Workshop on Visual Computing for Biology and Medicine (EG VCBM) |
 | 2018 BibTeX PDF | Marcin Kopaczka, Philipp Gräbel and Dorit Merhof Improved Facial Landmark Detection with Robust Statistics and Feature-Based Active Appearance Models In: 15th International Conference on Signal Processing and Multimedia Applications (SIGMAP) |
 | 2018 BibTeX PDF | Marcin Kopaczka, Raphael Kolk and Dorit Merhof A Fully Annotated Thermal Face Database and its Application for Thermal Facial Expression Recognition In: IEEE International Instrumentation and Measurement Technology Conference (I2MTC) |
 | 2018 BibTeX PDF | Marcin Kopaczka, Lisa Ernst, Jakob Heckelmann, Christoph Schorn, René Tolba and Dorit Merhof Automatic Key Frame Extraction From Videos For Efficient Mouse Pain Scoring In: 5th International Conference on Signal Processing and Integrated Networks (SPIN) |
 | 2018 BibTeX PDF | Marcin Kopaczka, Thomas Jantos and Dorit Merhof Towards Analysis of Mental Stress using Thermal Infrared Tomography In: Bildverarbeitung für die Medizin (BVM) |
 | 2018 BibTeX PDF | Marcin Kopaczka, Marco Saggiomo, Moritz Guettler, Thomas Gries and Dorit Merhof Fully Automatic Faulty Weft Thread Detection Using a Camera System and Feature-Based Pattern Recognition In: 7th International Conference on Pattern Recognition Applications and Methods (ICPRAM) |
 | 2018 BibTeX PDF | T. V. Spina, J. Stegmaier, A. Falcao, E. Meyerowitz, A. Cunha SEGMENT3D: A Web-based Application for Collaborative Segmentation of 3D Images used in the Shoot Apical Meristem In: IEEE International Symposium on Biomedical Imaging (ISBI), Washington D.C., USA |
 | 2018 BibTeX PDF | J. Stegmaier, T. V. Spina, A. Falcao, A. Bartschat, R. Mikut, E. Meyerowitz, A. Cunha Cell Segmentation in 3D Microscopy Images using Supervoxel Merge-Forests with CNN-based Hypothesis Selection In: IEEE International Symposium on Biomedical Imaging (ISBI), Washington D.C., USA |
 | 2018 BibTeX PDF | Christoph Haarburger, Johannes Rüther, Daniel Truhn, Simone Schrading, Daniel Bug, Christiane K. Kuhl, Dorit Merhof Abbreviated Breast Biopsy Procedure by Registration of Craniocaudal and Mediolateral Breast MR Images In: IEEE International Symposium on Biomedical Imaging (ISBI) |
 | 2018 BibTeX PDF | Christoph Haarburger, Peter Langenberg, Daniel Truhn, Hannah Schneider, Johannes Thüring, Simone Schrading, Christiane K. Kuhl and Dorit Merhof Transfer Learning for Breast Cancer Malignancy Classification based on Dynamic Contrast-Enhanced MR Images In: Bildverarbeitung für die Medizin (BVM) |
 | 2018 BibTeX PDF | Laxmi Gupta, Barbara Mara Klinkhammer, Peter Boor, Dorit Merhof and Michael Gadermayr Stain Independent Segmentation of Whole Slide Images: A Case Study in Renal Histology In: IEEE International Symposium on Biomedical Imaging (ISBI) |
 | 2018 BibTeX PDF | Philipp Gräbel, Martina Crysandt, Reinhild Herwartz, Melanie Hoffmann, Barbara M. Klinkhammer, Peter Boor, Tim H. Brümmendorf, Dorit Merhof Evaluating Out-of-the-box Methods for the Classification of Hematopoietic Cells in Images of Stained Bone Marrow In: MICCAI Workshop on Computational Pathology (COMPAY) |
 | 2018 BibTeX PDF | Michael Gadermayr, Vitus Appel, Barbara M. Klinkhammer, Peter Boor and Dorit Merhof Which Way Round? A Study on the Performance of Stain-Translation for Segmenting Arbitrarily Dyed Histological Images In: International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI) |
 | 2018 BibTeX PDF | Michael Gadermayr, Dennis Eschweiler, Barbara Mara Klinkhammer, Peter Boor and Dorit Merhof Gradual Domain Adaptation for Segmenting Whole Slide Images Showing Pathological Variability In: International Conference on Image and Signal Processing (ICISP) |