Marcin Kopaczka, Marco Saggiomo, Moritz Güttler, Kevin Kielholz and Dorit Merhof Detection and Classification of Faulty Weft Threads Using Both Feature-Based and Deep Convolutional Machine Learning Methods In: Pattern Recognition Applications and Methods (ICPRAM 2018, Revised Selected Papers)
2019
Joschka zur Jacobsmühlen Image-based methods for inspection of laser beam melting processes
Journal publications
2019
Michael Gadermayr, Kexin Li, Madlaine Müller, Daniel Truhn, Nils Krämer, Dorit Merhof and Burkhard Gess Domain-specific data augmentation for segmenting MR images of fatty infiltrated human thighs with neural networks In: Journal of Magnetic Resonance Imaging 49 (6)
2019
Lisa Ernst, Marcin Kopaczka, Mareike Schulz, Steven R. Talbot, Leonie Zieglowski, Marco Meyer, Stefan Bruch, Dorit Merhof and René H. Tolba Improvement of the Mouse Grimace Scale set-up for Implementing of a Semi-automated Mouse Grimace Scale MGS Scoring (Part 1) In: Laboratory animals
2019
Lisa Ernst, Marcin Kopaczka, Mareike Schulz, Steven R. Talbot, Birgitta Struve, Christine Häger, André Bleich, Mattea Durst, Paulin Jirkof, Margarete Arras, Roelof Maarten van Dijk, Nina Miljanovic, Heidrun Potschka, Dorit Merhof and René H. Tolba Semi-automated generation of pictures for the Mouse Grimace Scale: A multi-laboratory analysis (Part 2) In: Laboratory animals
2019
K. Neeraj, V. Ruchika, A. Deepak, Z. Yanning, F. O. Omer, T. Efstratios, C. Hao, A. H. Pheng, L. Jiahui, H. Zhiqiang, [...], D. Eschweiler, J. Stegmaier and others A Multi-organ Nucleus Segmentation Challenge In: IEEE Transactions on Medical Imaging
2019
Leon Weninger, Christoph Haarburger and Dorit Merhof Robustness of Radiomics for Survival Prediction of Brain Tumor Patients Depending on Resection Status In: Frontiers in Computational Neuroscience 13
2019
Laura Hoppe Alvarez, Sabine Eisold, Rustam A. Gumerov, Martin Strauch, Andrey A. Rudov, Pia Lenssen, Dorit Merhof, Igor I. Potemkin, Ulrich Simon and Dominik Wöll Deformation of Microgels at Solid-Liquid Interfaces Visualized in Three-Dimension In: Nano Letters 19 (12)
2019
J. Christopher Edgar, Marissa Dipiero, Emma McBride, Heather L. Green, Jeffrey I. Berman, Matthew Ku, Song Liu, Lisa Blaskey, Emily Kuschner, Megan Airey, Judith L. Ross, Luke Bloy, Mina Kim, Simon Koppers, William Gaetz, Robert T. Schultz and Timothy P. L. Roberts Abnormal maturation of the resting-state peak alpha frequency in children with autism spectrum disorder In: Human Brain Mapping
2019
Mathias Wien, Jill M. Boyce, Thomas Stockhammer and Wen-Hsiao Peng Standardization Status of Immersive Video Coding In: IEEE Journal on Emerging and Selected Topics in Circuits and Systems 9 (1)
2019
Georg Wimmer, Michael Gadermayr, Gernot Wolkersdörfer, Roland Kwitt, Toru Tamaki, Jens Tischendorf, Michael Häfner, Shigeto Yoshida, Shinji Tanaka, Dorit Merhof, Andreas Uhl Quest for the best endoscopic imaging modality for computer-assisted colonic polyp staging In: World Journal of Gastroenterology
2019
Mathias Wien, Jill M. Boyce, Thomas Stockhammer and Wen-Hsiao Peng Guest Editorial Immersive Video Coding and Transmission In: IEEE Journal on Emerging and Selected Topics in Circuits and Systems 9 (1)
2019
Daniel Truhn, Björn Sondern, Simon Oehrl, Markus Tingart, Matthias Knobe, Dorit Merhof, Christiane Kuhl, Johannes Thüring and Sven Nebelung Differentiation of human cartilage degeneration by functional MRI mapping — an ex vivo study In: European Radiology
2019
Daniel Truhn, Simone Schrading, Christoph Haarburger, Hannah Schneider, Dorit Merhof and Christiane Kuhl Radiomic versus Convolutional Neural Networks Analysis for Classification of Contrast-enhancing Lesions at Multiparametric Breast MRI In: Radiology 290 (2)
2019
Chantal MW Tax, Francesco Grussu, Enrico Kaden, Lipeng Ning, Umesh Rudrapatna, John Evans, Samuel St-Jean, Alexander Leemans, Simon Koppers, Dorit Merhof, others Cross-scanner and cross-protocol diffusion MRI data harmonisation: A benchmark database and evaluation of algorithms In: NeuroImage
2019
Marcin Kopaczka, Lukas Breuer, Justus Schock and Dorit Merhof A Modular System for Detection, Tracking and Analysis of Human Faces in Thermal Infrared Recordings In: Sensors
2019
Marcin Kopaczka, Raphael Kolk, Justus Schock, Felix Burkhard and Dorit Merhof A Thermal Infrared Face Database With Facial Landmarks and Emotion Labels In: IEEE Transactions on Instrumentation and Measurement
2019
Christoph Haarburger, Justus Schock, Michael Baumgartner, Oliver Rippel and Dorit Merhof Delira: A High-Level Framework for Deep Learning in Medical Image Analysis In: Journal of Open Source Software
2019
M. Grösche, A. E. Zoheir, J. Stegmaier, R. Mikut, D. Mager, J. G. Korvink, K. S. Rabe and C. M. Niemeyer Microfluidic Chips for Life Sciences—A Comparison of Low Entry Manufacturing Technologies In: Small 15
2019
V. Gerber, L. Yang, M. Takamiya, V. Ribes, V. Gourain, R. Peravali, J. Stegmaier, R. Mikut, M. Reischl, M. Ferg, U. Strähle The HMG Box Transcription Factors Sox1a and Sox1b Specify a New Class of Glycinergic Interneuron in the Spinal Cord of Zebrafish Embryos In: Development 146 (4)
2019
Michael Gadermayr, Laxmi Gupta, Vitus Appel, Peter Boor, Barbara Mara Klinkhammer and Dorit Merhof Generative Adversarial Networks for Facilitating Stain-Independent Supervised & Unsupervised Segmentation: A Study on Kidney Histology In: IEEE Transactions on Medical Imaging
2019
Michael Gadermayr, Ann-Kathrin Dombrowski, Barbara Mara Klinkhammer, Peter Boor and Dorit Merhof CNN Cascades for Segmenting Sparse Objects in Gigapixel Whole Slide Images In: Computerized Medical Imaging and Graphics 71
2019
Daniel Bug, Friedrich Feuerhake, Eva Oswald, Julia Schüler and Dorit Merhof Semi-Automated Analysis of Digital Whole Slides from Humanized Lung-Cancer Xenograft Models for Checkpoint Inhibitor Response Prediction In: Oncotarget
2019
A. Bartschat, S. Allgeier, T. Scherr, J. Stegmaier, S. Bohnand an K.-M. Reichert, A. Kuijper, M. Reischl, O. Stachs, B. Köhler, R. Mikut Fuzzy Tissue Detection for Real-Time Focal Control in Corneal Confocal Microscopy In: at Automatisierungstechnik 67 (10)
Conference publications
2019
Leon Weninger, Qianyu Liu and Dorit Merhof Multi-Task Learning for Brain Tumor Segmentation In: MICCAI Brainlesion Workshop (BrainLes)
2019
Daniel Bug, Philipp Gräbel, Friedrich Feuerhake, Eva Oswald, Julia Schüler and Dorit Merhof Supervised and Unsupervised Cell-Nuclei Detection in Immunohistology In: 2nd MICCAI Workshop on Computational Pathology (COMPAY)
2019
Martin Strauch, Karl Krüger, Latha Mukunda, Alja Lüdke, C. Giovanni Galizia and Dorit Merhof Interpolating maps between neural response spaces for chemosensing with fruit fly antenna sensors. In: IEEE International Conference on Bioinformatics and Bioengineering (BIBE)
2019
Philipp Gräbel, Martina Crysandt, Reinhild Herwartz, Melanie Hoffmann, Barbara M. Klinkhammer, Peter Boor, Tim H. Brümmendorf, Dorit Merhof Refinement of Weak Annotations for the Segmentation of Bone Marrow Leukocytes In: 2nd MICCAI Workshop on Computational Pathology (COMPAY)
2019
Leon Weninger, Simon Koppers, Chuh-Hyoun Na, Kerstin Juetten and Dorit Merhof Free-Water Correction in Diffusion MRI: A Reliable and Robust Learning Approach In: MICCAI Workshop on Computational Diffusion MRI (CDMRI)
2019
Christoph Haarburger, Michael Baumgartner, Daniel Truhn, Mirjam Broeckmann, Hannah Schneider, Simone Schrading, Christiane Kuhl and Dorit Merhof Multi Scale Curriculum CNN for Context-Aware Breast MRI Malignancy Classification In: International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
2019
Leon Weninger, Imke Krauhausen and Dorit Merhof Semantic Segmentation of Brain Tumors in MRI Data without any Labels In: Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM)
2019
Oliver Rippel, Daniel Truhn, Johannes Thüring, Christoph Haarburger, Christiane K. Kuhl and Dorit Merhof Prediction of Liver Function based on DCE-CT In: Bildverarbeitung für die Medizin (BVM)
2019
Simon Koppers, Edouard Coussoux, Sandro Romanzetti, Kathrin Reetz, Dorit Merhof Sodium Image Denoising based on a Convolutional Denoising Autoencoder In: Bildverarbeitung für die Medizin (BVM)
2019
Marcin Kopaczka, Daniel Tillmann, Lisa Ernst, Justus Schock, Ren'e H. Tolba and Dorit Merhof Assessment of Laboratory Mouse Activity in Video Recordings Using Deep Learning Methods In: International Engineering in Medicine and Biology Conference (EMBC)
2019
Christoph Haarburger, Nicolas Horst, Daniel Truhn, Mirjam Broeckmann, Simone Schrading, Christiane Kuhl and Dorit Merhof Multiparametric Magnetic Resonance Image Synthesis using Generative Adversarial Networks In: Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM)
2019
Christoph Haarburger, Philippe Weitz, Oliver Rippel and Dorit Merhof Image-based Survival Prediction for Lung Cancer Patients using CNNs In: IEEE International Symposium on Biomedical Imaging (ISBI)
2019
Laxmi Gupta, Barbara Mara Klinkhammer, Peter Boor, Dorit Merhof and Michael Gadermayr GAN-Based Image Enrichment in Digital Pathology Boosts Segmentation Accuracy In: International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
2019
Laxmi Gupta, Barbara Mara Klinkhammer, Peter Boor, Dorit Merhof and Michael Gadermayr Iterative learning to make the most of unlabeled and quickly obtained labeled data in histology In: 2nd International Conference on Medical Imaging with Deep Learning (MIDL)
2019
Michael Gadermayr, Laxmi Gupta, Barbara Mara Klinkhammer, Peter Boor and Dorit Merhof Unsupervisedly Training GANs for Segmenting Digital Pathology with Automatically Generated Annotations In: 2nd International Conference on Medical Imaging with Deep Learning (MIDL)
2019
Dennis Eschweiler, Tim Klose, Florian Nicolas Müller-Fouarge, Marcin Kopaczka, Johannes Stegmaier Towards Annotation-Free Segmentation of Fluorescently Labeled Cell Membranes in Confocal Microscopy Images In: MICCAI International Workshop on Simulation and Synthesis in Medical Imaging (SASHIMI)
2019
Dennis Eschweiler, Thiago V. Spina, Rohan C. Choudhury, Elliot Meyerowitz, Alexandre Cunha, Johannes Stegmaier CNN-based Preprocessing to Optimize Watershed-based Cell Segmentation in 3D Confocal Microscopy Images In: IEEE International Symposium on Biomedical Imaging (ISBI)
2019
Long Chen, Martin Strauch and Dorit Merhof Instance Segmentation of Biomedical Images with an Object-aware Embedding Learned with Local Constraints In: International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
2019
Long Chen, Martin Strauch, Matthias Daub, Marcus Jansen, Hans-Georg Luigs and Dorit Merhof Instance Segmentation of Nematode Cysts in Microscopic Images of Soil Samples In: International Engineering in Medicine and Biology Conference (EMBC)
2019
Daniel Bug, Dennis Eschweiler, Qianyu Liu, Justus Schock, Leon Weninger, Friedrich Feuerhake, Julia Schüler, Johannes Stegmaier and Dorit Merhof Combined Learning for Similar Tasks with Domain-Switching Networks In: International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI)
2019
Nassim Bouteldja, Dorit Merhof, Jan Ehrhardt and Mattias P. Heinrich Deep Multi-Modal Encoder-Decoder Networks for Shape Constrained Segmentation and Joint Representation Learning In: Bildverarbeitung für die Medizin (BVM)
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