Books and book chapters

2022

D. Eschweiler, I. Laube, J. Stegmaier
Spatiotemporal Image Generation for Embryomics Applications
In: Biomedical Image Synthesis and Simulation: Methods and Applications



 

Journal publications

2022

Rippel, Oliver, Zwinge, Corinna and Merhof, Dorit
Increasing the Generalization of Supervised Fabric Anomaly Detection Methods to Unseen Fabrics
In: Sensors 22 (13)

2022

Heather L Green, Marissa Dipiero, Simon Koppers, Jeffrey I Berman, Luke Bloy, Song Liu, Emma McBride, Matthew Ku, Lisa Blaskey, Emily Kuschner, and others
Peak alpha frequency and thalamic structure in children with typical development and autism spectrum disorder
In: Journal of Autism and Developmental Disorders 52 (1)

2022

Lisa Ernst, Stefan Bruch, Marcin Kopaczka, Dorit Merhof, Andre Bleich, Rene H. Tolba, Steven R. Talbot
A Model-Specific Simplification of the Mouse Grimace Scale Based on the Pain Response of Intraperitoneal CCl4 Injections
In: Scientific Reports

2022

Laxmi Gupta, Barbara Mara Klinkhammer, Claudia Seikrit, Nina Fan, Nassim Bouteldja, Philipp Gräbel, Michael Gadermayr, Peter Boor and Dorit Merhof
Large-scale extraction of interpretable features provides new insights into kidney histopathology – a proof-of-concept study
In: Journal of Pathology Informatics

2022

S. Strauss, A. Runions, B. Lane, D. Eschweiler, N. Bajpai, N. Trozzi, A.-L. Routier-Kierzkowska, S. Yoshida, S. R. da Silveira, A. Vijayan, R. Tofanelli, M. Majda, E. Echevin, C. Le Gloanec, H. Bertrand-Rakusova, M. Adibi, K. Schneitz, G. Bassel, D. Kierzkowski, J. Stegmaier, M. Tsiantis, R. S. Smith
Using Positional Information to Provide Context for Biological Image Analysis with MorphoGraphX 2.0
In: eLife 11

2022

Eva Oswald, Daniel Bug, Anne Grote, Kanstantsin Lashuk, Nassim Bouteldja, Dorothee Lenhard, Anne Löhr, Anke Behnke, Volker Knauff, Anna Edinger, Kerstin Klingner, Gabriele Niedermann, Dorit Merhof, Friedrich Feuerhake and Julia Schueler
The immune cell infiltration pattern in non-small cell lung cancer PDX models is a model immanent feature and correlates with a distinct molecular and phenotypic make-up
In: Journal for ImmunoTherapy of Cancer

2022

Nassim Bouteldja, Barbara M. Klinkhammer, Tarek Schlaich, Peter Boor and Dorit Merhof
Improving Unsupervised Stain-To-Stain Translation using Self-Supervision and Meta-Learning
In: Journal of Pathology Informatics

2022

Zhilei Zhao, Jessica L. Zung, Annika Hinze, Alexis L. Kriete, Azwad Iqbal, Meg A. Younger, Benjamin J. Matthews, Dorit Merhof, Stephan Thiberge, Rickard Ignell, Martin Strauch and Carolyn S. McBride
Mosquito brains encode unique features of human odour to drive host seeking
In: Nature

2022

R. Windoffer, N. Schwarz, S. Yoon, T. Piskova, M. Scholkemper, J. Stegmaier, A. Bönsch, J. Di Russo, R. Leube
Quantitative Mapping of Keratin Networks in 3D
In: eLife 11

2022

U. Klinge, A. Dievernich and J. Stegmaier
Quantitative Characterization of Macrophage, Lymphocyte and Neutrophil Subtypes within the Foreign Body Granuloma of Human Mesh Explants by 5 Marker Multiplex Fluorescence Microscopy
In: Frontiers in Medicine


 

Conference publications

2022

Reza Azad, Nika Khosravi and Dorit Merhof
SMU-Net: Style matching U-Net for brain tumor segmentation with missing modalities
In: 5th International Conference on Medical Imaging with Deep Learning (MIDL)

2022

Philipp Gräbel, Julian Thull, Martina Crysandt, Barbara M. Klinkhammer, Peter Boor, Tim H. Brümmendorf, Dorit Merhof
Automatic Embedding Interventions for the Classification of Hematopoietic Cells
In: 26th International Conference on Pattern Recognition (ICPR)

2022

Long Chen, Martin Strauch, Matthias Daub, Hans-Georg Luigs, Marcus Jansen and Dorit Merhof$
Learning to Segment Fine Structures Under Image-Level Supervision With an Application to Nematode Segmentation
In: International Engineering in Medicine and Biology Conference (EMBC)

2022

Philipp Gräbel, Martina Crysandt, Barbara M. Klinkhammer, Peter Boor, Tim H. Brümmendorf, Dorit Merhof
Ordinal classification and regression techniques for distinguishing neutrophilic cell maturity stages in human bone marrow
In: International Conference on Pattern Recognition and Artificial Intelligence (ICPRAI)

2022

Philipp Gräbel, Julian Thull, Martina Crysandt, Barbara M. Klinkhammer, Peter Boor, Tim H. Brümmendorf, Dorit Merhof
Spatial Maturity Regression for the Classification of Hematopoietic Cells
In: IEEE International Conference on Image Processing Theory and Tools and Applications (IPTA)

2022

Philipp Gräbel, Julian Thull, Martina Crysandt, Barbara M. Klinkhammer, Peter Boor, Tim H. Brümmendorf, Dorit Merhof
Analysis of automatically generated embedding guides for cell classification
In: IEEE International Conference on Image Processing Theory and Tools and Applications (IPTA)

2022

Justus Schock, Yu-Chia Lan, Daniel Truhn, Marcin Kopaczka, Stefan Conrad, Sven Nebelung and Dorit Merhof
Monoplanar CT Reconstruction with GANs
In: IEEE International Conference on Image Processing Theory and Tools and Applications (IPTA)

2022

Marcin Kopaczka, Lisa Ernst, Mareike Schulz, Rene Tolba and Dorit Merhof
Computation of Traveled Distance of Pigs in an Open Field With Fully Convolutional Neural Networks
In: Bildverarbeitung fuer die Medizin (BVM)

2022

Leon Weninger, Mushawar Ahmad and Dorit Merhof
From supervised to unsupervised harmonization of diffusion MRI acquisitions
In: IEEE International Symposium on Biomedical Imaging (ISBI)

2022

Yuli Wu, Peter Walter and Dorit Merhof
Multiscale Softmax Cross Entropy for Fovea Localization on Color Fundus Photography
In: Bildverarbeitung fuer die Medizin (BVM)

2022

Oliver Rippel, Nikolaj Schönfelder, Khosrow Rahimi, Juliana Kurniadi, Andreas Herrmann and Dorit Merhof
Panoptic Segmentation of Animal Fibers
In: 2022 IEEE International Instrumentation and Measurement Technology Conference (I2MTC)

2022

Oliver Rippel, Arnav Chavan, Chucai Lei and Dorit Merhof
Transfer Learning Gaussian Anomaly Detection by Fine-tuning Representations
In: Proceedings of the 2nd International Conference on Image Processing and Vision Engineering - IMPROVE

2022

Leon Weninger, Jarek Ecke, Na, Chuh-Hyoun Na, Kerstin Jütten and Dorit Merhof
Diffusion MRI Specific Pretraining by Self-Supervision on an Auxiliary Dataset
In: Bildverarbeitung fuer die Medizin (BVM)

2022

Oliver Rippel, Sergen Gülçelik, Khosrow Rahimi, Juliana Kurniadi, Andreas Herrmann and Dorit Merhof
Animal Fiber Identification under the Open Set Condition
In: 17th Joint Conference on Computer Vision, Imaging and Computer Graphics Theory and Applications (VISAPP)

2022

Dennis Eschweiler, Richard S. Smith and Johannes Stegmaier
Robust 3D Cell Segmentation: Extending the View of Cellpose
In: (Accepted) IEEE International Conference in Image Processing (ICIP)